CDS

Accession Number TCMCG007C44041
gbkey CDS
Protein Id XP_009104339.1
Location complement(join(19328788..19329037,19329139..19329288,19329385..19329456,19329565..19329650,19329729..19329887,19330097..19330145,19330230..19330354,19330430..19330600,19330672..19331030,19331597..19331744))
Gene LOC103830319
GeneID 103830319
Organism Brassica rapa

Protein

Length 522aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009106091.3
Definition beclin-1-like protein isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category T
Description Autophagy protein Apg6
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K08334        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04136        [VIEW IN KEGG]
ko04137        [VIEW IN KEGG]
ko04138        [VIEW IN KEGG]
ko04140        [VIEW IN KEGG]
ko04215        [VIEW IN KEGG]
ko04371        [VIEW IN KEGG]
ko05167        [VIEW IN KEGG]
map04136        [VIEW IN KEGG]
map04137        [VIEW IN KEGG]
map04138        [VIEW IN KEGG]
map04140        [VIEW IN KEGG]
map04215        [VIEW IN KEGG]
map04371        [VIEW IN KEGG]
map05167        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000045        [VIEW IN EMBL-EBI]
GO:0000407        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005942        [VIEW IN EMBL-EBI]
GO:0006605        [VIEW IN EMBL-EBI]
GO:0006623        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006914        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006995        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007033        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009267        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009620        [VIEW IN EMBL-EBI]
GO:0009846        [VIEW IN EMBL-EBI]
GO:0009856        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0009991        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0016236        [VIEW IN EMBL-EBI]
GO:0019898        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031667        [VIEW IN EMBL-EBI]
GO:0031668        [VIEW IN EMBL-EBI]
GO:0031669        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034271        [VIEW IN EMBL-EBI]
GO:0034272        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0035032        [VIEW IN EMBL-EBI]
GO:0042594        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043562        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044706        [VIEW IN EMBL-EBI]
GO:0044804        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0045324        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0050832        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0061919        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071496        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]
GO:0072665        [VIEW IN EMBL-EBI]
GO:0072666        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1905037        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGGAAAGAGGAGAATAATAATCATCAAACAGATAATAAAAGTCGGGATCTTCCGAAATGGGTCTGCCAGAAATGTCAGCACTCTCTTACCATCGTCGGCGTCGATTCCTACGCCGGCAAATTCTGCAACGATTCCCCTCCTTCCGCAGCAATGCAAGGCTCTTCCATCCATGGAGCCAACAGTGTTCTTGGTTCAACACGCATGGACAACTCTTTTGTTGTTCTACCTCGACACAAGCCTCAAGCTCAGGGAATTCCTCCACGGCCTCGTGGGGCTTCTTCTCCTCAGCCTCACGATGCAACCCACTCTGGGAAGGCAATGGATGAATCGTTTGTTGTCGTGTATAAGTCTGAGTCAGCTTCTGACTCAGGAGCCGCTTCTCAAAATACGTTGTCTTCGGTTGAAGTGGGCCAGAATGGTCCGTTGCATTCAAATACTTCTGGGTTTAATTCGAGTATCAATGTCTTAAACCGTGCGTTCGATATCGCAAGAACTCAGACACAGGTTGAACAGCCGTTGTGCCTGGAATGCATGAGGGTACTGTCTGATAAACTTGAAAAGGAAGTCGAGGATGTGACGAGAGACGTGGAAGCATACGAAGCATGCGTCCAACGGTTAGAAGGAGAGACCCAAGATGTGCTTAGTGAAGCTGATTTTCTCAGGGAAAAGAGGAAGATTGAAGAAGAAGAAAGAAAGCTTGTTGCAGCTATAGAAGAATCAGAGAAGCAAAACGCTGAGGTGAACCGTCAGCTGAAGGAACTTGAATCAAAGGGAAATCGCTTTAACGAACTTGAAGATCGGTATTGGCAAGAGTTCAACAATTTCCAGTGTCAACTTATAGCTCATCAGGAAGAGAGAGATGCAATATTGGCAAAGATCGAAGTCTCACAAGCACATTTAGAGTTATTAAATAAGACAAATGTACTGATTGATGCCTTCCCCATACGGTACGACGGAGATTTTGGTACAATCAACAATTTTCGACTTGGGAGACTCCCTAAAGCACCGGTTGAGTGGGATGAGATCAATGCTGCTTGGGGACAAGCCTGTCTTCTCCTCCACACCATGTGTAACTACTTCCGGCCAAAGTTTCAATGCCGAGTCAAAATACAGCCAATGGGAAGTTATCCTAGAATTGTGGACAGCACCAACAGCACTTATGAGCTGTTTGGTCCTGTAAACTTGTTTTGGAGCACTAGATACGATAAAGCCATGACGTTGTATCTGATATGTCTTAAAGACTTTGCTGATTTCGCAAACGCAAAGGACCAAGAGAACAATATTCCACCAGAGAAATGCCTCAAACTCCCATTCAAAATCGAAAATGACAAAGTGGAGTCATATTCAATAACGCAGAGCTTTAACAAGCAAGAGAACTGGACCAAAGCACTGAAGTATACTCTTTGCAACCTGAAATGGGCTCTCTATTGGTTCGTTGGGAACACTAACTTCCAGCCTCTCTCTGCAACGGTCTCTTTGCCTTCTGATGTATCAGCAGCTGGTTCCTTGTACGCCAAGCGTGGTCCTGGTTCTAATAACCCGTCTAGTAAAACCTCAAGAAACTAG
Protein:  
MRKEENNNHQTDNKSRDLPKWVCQKCQHSLTIVGVDSYAGKFCNDSPPSAAMQGSSIHGANSVLGSTRMDNSFVVLPRHKPQAQGIPPRPRGASSPQPHDATHSGKAMDESFVVVYKSESASDSGAASQNTLSSVEVGQNGPLHSNTSGFNSSINVLNRAFDIARTQTQVEQPLCLECMRVLSDKLEKEVEDVTRDVEAYEACVQRLEGETQDVLSEADFLREKRKIEEEERKLVAAIEESEKQNAEVNRQLKELESKGNRFNELEDRYWQEFNNFQCQLIAHQEERDAILAKIEVSQAHLELLNKTNVLIDAFPIRYDGDFGTINNFRLGRLPKAPVEWDEINAAWGQACLLLHTMCNYFRPKFQCRVKIQPMGSYPRIVDSTNSTYELFGPVNLFWSTRYDKAMTLYLICLKDFADFANAKDQENNIPPEKCLKLPFKIENDKVESYSITQSFNKQENWTKALKYTLCNLKWALYWFVGNTNFQPLSATVSLPSDVSAAGSLYAKRGPGSNNPSSKTSRN